The ignorance of market friction causes the invalid portfolio investment, and whether the arrangement of capital structure is reasonable will influence the income of funding cost, effective utilization of non-selfowned and funding risk level. Therefore, portfolio model under the assumption of complete market lacks of practically instructiveness. Capital structure factor and transaction cost do influence the portfolio decision in the capital market. On the basis of capital structure factor and transaction cost during the process of investment, this article improve the portfolio model that CVaR control proposed by Rockafeller and Uryasev, built a CVaR portfolio model with capital structure factor and transaction cost. Empirical studies indicates that the changes of capital structure factor and transaction cost lead to the movement of efficient frontier on CVaR portfolio model and the changes of upper and lower limit.